roadmap的官网是:http://www.roadmapepigenomics.org/
精选的129个细胞系,细胞系的介绍如下:http://www.broadinstitute.org/~anshul/projects/roadmap/metadata/EID_metadata.tab
对每个细胞系,都至少处理了5个核心组蛋白修饰数据,还有其它若干转录因子数据。
官网介绍的很详细,我就不翻译了:
- chromatin structure (5C)
- open chromatin (DNase-seq and FAIRE-seq)
- histone modifications and DNA-binding of over 100 transcription factors (ChIP-seq)
- RNA transcription (RNAseq and CAGE)